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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922307.1_cds_XP_016471110.1_63495
CDS Infomation

[gene=LOC107793294] [db_xref=GeneID:107793294] [protein=serine carboxypeptidase-like 42] [protein_id=XP_016471110.1] [location=join(95449..95692,98664..98771,98887..98979,99099..99191,99310..99395,99491..99769,100035..100168,100309..100401,101198..101480)] [gbkey=CDS]
Sequence

ATGCAAATGGGATTTCATCATCTTCTTCTTATAGGATTTGGTTTTATTATTATCTTGAAT
AATGTTAATGGACATCCAATAGAAGATCTGGTGGAAAATTTACCAGGACAACCAAAAGTT
GGGTTTAGACAATACGCTGGATATGTGGATGTAGATGAAAAGGCAGGGAGAAGTTTGTTT
TATTACTTTGTTGAAGCTGAGAAAGATGCTGATAAACTTCCTCTTACTCTTTGGTTAAAT
GGAGGTCCAGGATGTTCCTCAATTGGAGGGGGTGCCTTTACAGAACTAGGACCCTTCTTT
CCTAGAGGTGATGGCCGTGGTCTCAGAAGAAATACTAAATCTTGGAATAAAGCATCAAAT
CTTCTATTTATTGAATCTCCTGCTGGTGTTGGATGGTCTTATTCAAACACATCTAGTGAT
TATACTTGCGGAGATGACTCCACTGCTAAGGATATGCTCACTTTCATGATCAGATGGTAC
GCAAAGTTTTCAGAATTAAAATCTAAGCCTTTGTTCCTTACAGGTGAAAGTTATGCAGGA
CATTATATACCACAGTTGGCAAATGTCATACTAGACTACAACAAGCAGTCCAATGATTTT
AAGTTTAACCTAAAGGGAGTAGCTATTGGAAATCCACTTTTGAGACTAGACAGAGATGTT
CCAGCAGTGTACGAATATTACTGGTCACATGGAATGATATCAGATGAAATATATTTGAGA
ATCAAAGAACACTGCAATTTTGATGATTATGAATTCCCAGTTCCTCATAATGAGCCAATC
TCATGCAACCAAGCTATTGATGAAGCATATAAAATAATTTCTGACTATATTAATGTGTAC
GACGTTATTTTGGATGTCTGTTATCCTTCTATCGTTCAGCAAGAGCTGCGTTTACATAAA
CAAGTTACAAAGATGAGTGTTGGAGTTGATGTTTGCATGACATCAGAAAGATACTTCTAT
TTCAACCTTCCTGAGGTTCAGAAGGCTCTTCATGCTAATCGCACTAATCTACCTTACGAA
TGGAGCATGTGCAGTGATGTGCTGAATTACTCTCAATCAGATGGTGACACTGATATGCTT
CCATCCCTCAAAAACATTATTCAACATGATGTTCCTCTTTGGATATTCAGTGGAGATCAA
GACTCAGTGGTACCACTAATAGGGTCAAGAACATTAGTGCGTGAATTAGCTAATGATTTA
AATTTGAAGACAACAGTAGCATATGGAGCATGGTTTCACAAAGGGCAAGTAGGAGGATGG
CAAGTTGAATATGGTCATAAACTCACTTTTGCAACAGTAAGAGGAGCTGCTCATATGGTT
CCATATGCACAGCCATCTAGGGCTTTGCATCTTTTCAGCTCATTCGTTCATGGAAGAAGA
TTGCCTAATACCACTCGTATTCCCATTGCCTGA

Peptide Sequence

PEP ID

XP_016471110.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tabacum]
Sequence

MQMGFHHLLLIGFGFIIILNNVNGHPIEDLVENLPGQPKVGFRQYAGYVDVDEKAGRSLF
YYFVEAEKDADKLPLTLWLNGGPGCSSIGGGAFTELGPFFPRGDGRGLRRNTKSWNKASN
LLFIESPAGVGWSYSNTSSDYTCGDDSTAKDMLTFMIRWYAKFSELKSKPLFLTGESYAG
HYIPQLANVILDYNKQSNDFKFNLKGVAIGNPLLRLDRDVPAVYEYYWSHGMISDEIYLR
IKEHCNFDDYEFPVPHNEPISCNQAIDEAYKIISDYINVYDVILDVCYPSIVQQELRLHK
QVTKMSVGVDVCMTSERYFYFNLPEVQKALHANRTNLPYEWSMCSDVLNYSQSDGDTDML
PSLKNIIQHDVPLWIFSGDQDSVVPLIGSRTLVRELANDLNLKTTVAYGAWFHKGQVGGW
QVEYGHKLTFATVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNTTRIPIA

Transcript Sequence

Gene sequence data has not been registered.